作者：Erich D Jarvis (1)
Siavash Mirarab (2)
Andre J Aberer (3)
Bo Li (4) (5) (6)
Peter Houde (7)
Cai Li (4) (6)
Simon Y W Ho (8)
Brant C Faircloth (10) (9)
Benoit Nabholz (11)
Jason T Howard (1)
Alexander Suh (12)
Claudia C Weber (12)
Rute R da Fonseca (6)
Alonzo Alfaro-N煤帽ez (6)
Nitish Narula (13) (7)
Liang Liu (14)
Dave Burt (15)
Hans Ellegren (12)
Scott V Edwards (16)
Alexandros Stamatakis (17) (3)
David P Mindell (18)
Joel Cracraft (19)
Edward L Braun (20)
Tandy Warnow (2)
Wang Jun (21) (22) (23) (24) (4)
M Thomas Pius Gilbert (25) (6)
Guojie Zhang (26) (4)
The Avian Phylogenomics Consortium

1. Department of Neurobiology ; Howard Hughes Medical Institute and Duke University Medical Center ; Durham ; NC ; 27710 ; USA
2. Department of Computer Science ; The University of Texas at Austin ; Austin ; TX ; 78712 ; USA
3. Scientific Computing Group ; Heidelberg Institute for Theoretical Studies ; Heidelberg ; Germany
4. China National GeneBank ; BGI-Shenzhen ; Shenzhen ; 518083 ; China
5. College of Medicine and Forensics ; Xi鈥檃n Jiaotong University ; Xi鈥檃n ; 710061 ; China
6. Centre for GeoGenetics ; Natural History Museum of Denmark ; University of Copenhagen ; 脴ster Voldgade 5-7 ; 1350 ; Copenhagen ; Denmark
7. Department of Biology ; New Mexico State University ; Las Cruces ; NM ; 88003 ; USA
8. School of Biological Sciences ; University of Sydney ; Sydney ; NSW ; 2006 ; Australia
10. Department of Biological Sciences ; Louisiana State University ; Baton Rouge ; LA ; 70803 ; USA
9. Department of Ecology and Evolutionary Biology ; University of California Los Angeles ; Los Angeles ; CA ; 90095 ; USA
11. CNRS UMR 5554 ; Institut des Sciences de l鈥橢volution de Montpellier ; Universit茅 Montpellier II ; Montpellier ; France
12. Department of Evolutionary Biology ; Uppsala University ; SE-752 36 ; Uppsala ; Sweden
13. Biodiversity and Biocomplexity Unit ; Okinawa Institute of Science and Technology Onna-son ; Okinawa ; 904-0495 ; Japan
14. Department of Statistics and Institute of Bioinformatics ; University of Georgia ; Athens ; 30602 ; USA
15. Department of Genomics and Genetics ; The Roslin Institute and Royal (Dick) School of Veterinary Studies ; University of Edinburgh ; Easter Bush Campus ; Midlothian ; EH25 9RG ; UK
16. Department of Organismic and Evolutionary Biology and Museum of Comparative Zoology ; Harvard University ; Cambridge ; MA ; USA
17. Institute of Theoretical Informatics ; Department of Informatics ; Karlsruhe Institute of Technology ; D- 76131 ; Karlsruhe ; Germany
18. Department of Biochemistry & Biophysics ; University of California ; San Francisco ; CA ; 94158 ; USA
19. Department of Ornithology ; American Museum of Natural History ; New York ; NY ; 10024 ; USA
20. Department of Biology and Genetics Institute ; University of Florida ; Gainesville ; FL ; 32611 ; USA
21. Department of Biology ; University of Copenhagen ; Ole Maal酶es Vej 5 ; 2200 ; Copenhagen ; Denmark
22. Princess Al Jawhara Center of Excellence in the Research of Hereditary Disorders ; King Abdulaziz University ; Jeddah ; 21589 ; Saudi Arabia
23. Macau University of Science and Technology ; Avenida Wai long ; Taipa ; Macau ; 999078 ; China
24. Department of Medicine ; University of Hong Kong ; Hong Kong ; Hong Kong
25. Trace and Environmental DNA Laboratory Department of Environment and Agriculture ; Curtin University ; Perth ; WA ; 6102 ; Australia
26. Centre for Social Evolution ; Department of Biology ; Universitetsparken 15 ; University of Copenhagen ; DK-2100 ; Copenhagen ; Denmark

关键词：Avian genomes ; Phylogenomics ; Sequence alignments ; Species tree ; Gene trees ; Indels ; Transposable elements

刊名：GigaScience

出版年：2015

作者：Xindong Zhang (1) (2)
Lin Gao (1) (4)
Zhi-Ping Liu (3)
Luonan Chen (2) (4) (5)

1. School of Computer Science and Technology ; Xidian University ; Xi鈥檃n ; 710000 ; China
2. Key Laboratory of Systems Biology ; Institute of Biochemistry and Cell Biology ; Shanghai Institutes for Biological Sciences ; Chinese Academy of Sciences ; Shanghai ; 200031 ; China
4. Institute of Industrial Science ; University of Tokyo ; Tokyo ; 153-8505 ; Japan
3. Department of Biomedical Engineering ; School of Control Science and Engineering ; Shandong University ; Shandong ; 250061 ; China
5. School of Life Science and Technology ; ShanghaiTech University ; Shanghai ; 201210 ; China

关键词：Computational biology ; Gene expression profiling ; Network biomarker ; Type 2 diabetes mellitus

刊名：BMC Bioinformatics

出版年：2015

作者：Weicheng Wu (1)
Jing Jin (3)
Xiaojuan Liu (1) (6)
Yufei Zhang (4)
Meng Li (5)
Miaomiao Shao (1)
Yifan Qian (1)
Dongmei Zhang (1)
Haiyan Zhu (1)
Yuanyuan Ruan (1)
Jianhui Xie (1) (2)
Jianxin Gu (1)

1. Key Laboratory of Glycoconjugate Research ; Ministry of Health ; Department of Biochemistry and Molecular Biology ; Shanghai Medical College ; Fudan University ; Shanghai ; 200032 ; China
3. Institute of Glycobiological Engineering ; Zhejiang Provincial Key Laboratory of Medical Genetics ; Wenzhou Medical College ; Wenzhou ; 325035 ; China
6. Department of Pathogen Biology ; Medical College ; Nantong University ; Nantong ; Jiangsu ; 226001 ; China
4. Department of Immunology ; Shanghai Medical College ; Fudan University ; Shanghai ; 200032 ; China
5. Department of Dermatology ; Shanghai Key Laboratory of Molecular ; Mycology & PLA Key Laboratory of Fungal Diseases ; Changzheng Hospital ; Second Military Medical University ; Shanghai ; 200032 ; China
2. Department of Forensic Medicine ; Shanghai Medical College ; Fudan University ; Shanghai ; 200032 ; China

关键词：Fc moiety ; Extracellular domain ; Group II membrane proteins ; CLEC2

刊名：Glycoconjugate Journal

出版年：2015

作者：Xiangxiang Wan (1)
Xiaoyun Ding (1)
Shengcan Chen (2)
Haojun Song (1)
Haizhong Jiang (1)
Ying Fang (1)
Peifei Li (2)
Junming Guo (2)

1. Department of Gastroenterology ; Ningbo First Hospital ; No. 59 Liuting Street ; Ningbo ; 315010 ; China
2. Department of Biochemistry and Molecular Biology ; Zhejiang Provincial Key Laboratory of Pathophysiology ; Ningbo University School of Medicine ; Ningbo ; 315211 ; China

关键词：miRNAs ; lncRNAs ; Gastric carcinogenesis ; Mechanisms

刊名：Tumor Biology

出版年：2015

作者：Xuefei Shi (1)
Ming Sun (2)
Ying Wu (1)
Yanwen Yao (1)
Hongbing Liu (1)
Guannan Wu (1)
Dongmei Yuan (1)
Yong Song (1)

1. Department of Respiratory Medicine ; Jinling Hospital ; Nanjing University School of Medicine ; 305 East Zhongshan Road ; Nanjing ; 210002 ; Jiangsu Province ; China
2. Department of Biochemistry and Molecular Biology ; Nanjing Medical University ; Nanjing ; China

关键词：Long noncoding RNA ; Mechanism ; Post ; transcriptional regulation ; Cancer

刊名：Tumor Biology

出版年：2015

作者：Leif Andersson (1) (2)
Alan L Archibald (3)
Cynthia D Bottema (4)
Rudiger Brauning (5)
Shane C Burgess (6)
Dave W Burt (3)
Eduardo Casas (7)
Hans H Cheng (8)
Laura Clarke (9)
Christine Couldrey (10)
Brian P Dalrymple (11)
Christine G Elsik (12)
Sylvain Foissac (13)
Elisabetta Giuffra (14)
Martien A Groenen (15)
Ben J Hayes (16) (17) (18)
LuSheng S Huang (19)
Hassan Khatib (20)
James W Kijas (11)
Heebal Kim (21)
Joan K Lunney (22)
Fiona M McCarthy (23)
John C McEwan (24)
Stephen Moore (25)
Bindu Nanduri (26)
Cedric Notredame (27)
Yniv Palti (28)
Graham S Plastow (29)
James M Reecy (30)
Gary A Rohrer (31)
Elena Sarropoulou (32)
Carl J Schmidt (33)
Jeffrey Silverstein (34)
Ross L Tellam (35)
Michele Tixier-Boichard (14)
Gwenola Tosser-Klopp (13)
Christopher K Tuggle (30)
Johanna Vilkki (36)
Stephen N White (37) (38)
Shuhong Zhao (39)
Huaijun Zhou (40)
The FAANG Consortium

1. Science for Life Laboratory Uppsala ; Department of Medical Biochemistry and Microbiology ; Uppsala University ; Uppsala ; SE 751 23 ; Sweden
2. Department of Animal Breeding and Genetics ; Swedish University of Agricultural Sciences ; Uppsala ; SE-750 07 ; Sweden
3. The Roslin Institute and Royal (Dick) School of Veterinary Studies ; University of Edinburgh ; Edinburgh ; EH25 9RG ; UK
4. School of Animal and Veterinary Sciences ; The University of Adelaide ; Roseworthy ; SA ; 5371 ; Australia
5. Invermay Agricultural Centre ; AgResearch Limited ; Mosgiel ; 9053 ; New Zealand
6. College of Agriculture and Life Sciences ; University of Arizona ; Tucson ; AZ ; 85719 ; USA
7. National Animal Disease Center ; United States Department of Agriculture ; Agricultural Research Service ; Ames ; IA ; 50010 ; USA
8. Avian Disease and Oncology Laboratory ; United States Department of Agriculture ; Agricultural Research Service ; East Lansing ; MI ; 48823 ; USA
9. European Molecular Biology Laboratory European Bioinformatics Institute ; Hinxton ; Cambridge ; CB10 1SD ; UK
10. Livestock Improvement Corporation ; Hamilton ; 3284 ; New Zealand
11. Agriculture Flagship ; Commonwealth Scientific and Industrial Research Organisation ; St Lucia ; 4067 ; Brisbane ; Australia
12. Division of Animal Sciences ; University of Missouri ; Columbia ; MO ; 65211 ; USA
13. UMR1388 G茅n茅tique ; Physiologie et Syst猫mes d鈥橢levage (GenPhySE) ; French National Institute for Agricultural Research (INRA) ; F-31326 ; Castanet-Tolosan ; France
14. UMR1313 G茅n茅tique Animale et Biologie Int茅grative (GABI) ; French National Institute for Agricultural Research (INRA) ; F-78352 ; Jouy-en-Josas ; France
15. Animal Breeding and Genomics Centre ; Wageningen University ; 6708聽PB ; Wageningen ; The Netherlands
16. Biosciences Research Division ; Department of Environment and Primary Industries Victoria ; Bundoora ; 3083 ; Australia
17. Dairy Futures Cooperative Research Centre ; Bundoora ; 3083 ; VIC ; Australia
18. La Trobe University ; Bundoora ; 3086 ; VIC ; Australia
19. Key Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China ; Jiangxi Agricultural University ; Jiangxi ; 330029 ; People鈥檚 Republic of China
20. Department of Animal Sciences ; University of Wisconsin-Madison ; Madison ; WI ; 53706 ; USA
21. Department of Agricultural Biotechnology ; Seoul National University ; Seoul ; Republic of Korea
22. Animal Parasitic Diseases Laboratory ; United States Department of Agriculture ; Agricultural Research Service ; Beltsville ; MD ; 20705 ; USA
23. School of Animal and Comparative Biomedical Sciences ; University of Arizona ; Tucson ; AZ ; 85721 ; USA
24. Animal Productivity Group ; AgResearch Limited ; Mosgiel ; 9053 ; New Zealand
25. Centre for Animal Science ; Queensland Alliance for Agriculture & Food Innovation ; University of Queensland ; St Lucia ; QLD ; 4067 ; Australia
26. Department of Basic Sciences ; College of Veterinary Medicine and Institute for Genomics ; Biocomputing and Biotechnology ; Mississippi State University ; Mississippi ; MS ; 39762 ; USA
27. Comparative Bioinformatics ; Centre for Genomic Regulation (CRG) ; Dr. Aiguader 88 ; 08003 ; Barcelona ; Spain
28. National Center for Cool and Cold Water Aquaculture ; United States Department of Agriculture ; Agricultural Research Service ; Kearneysville ; WV ; 25430 ; USA
29. Livestock Gentec Centre ; Department of Agricultural ; Food and Nutritional Science ; University of Alberta ; Edmonton ; Alberta ; T6G 2C8 ; Canada
30. Department of Animal Science ; Iowa State University ; Ames ; IA ; 50011 ; USA
31. US Meat Animal Research Center ; United States Department of Agriculture ; Agricultural Research Service ; Clay Center ; NE ; 68933 ; USA
32. Institute of Marine Biology ; Biotechnology and Aquaculture ; Hellenic Centre for Marine Research ; 71003 ; Heraklion ; Greece
33. Department of Animal and Food Sciences ; University of Delaware ; Newark ; DE ; 19716 ; USA
34. Animal Production and Protection ; United States Department of Agriculture ; Agricultural Research Service Aquaculture ; Beltsville ; MD ; 20705 ; USA
35. CSIRO Agriculture ; Commonwealth Scientific and Industrial Research Organisation ; St Lucia ; 4067 ; Australia
36. Green Technology ; Natural Resources Institute Finland ; 31600 ; Jokioinen ; Finland
37. Animal Disease Research Unit ; United States Department of Agriculture ; Agricultural Research Service ; Pullman ; WA ; 99164-6630 ; USA
38. Department of Veterinary Microbiology and Pathology ; Washington State University ; Pullman ; WA ; 99164-7040 ; USA
39. Key Laboratory of Agricultural Animal Genetics ; Breeding and Reproduction of Ministry of Education of China ; Huazhong Agricultural University ; Wuhan ; Hubei ; 430070 ; People鈥檚 Republic of China
40. Department of Animal Science ; University of California ; Davis ; CA ; 95616 ; USA

刊名：Genome Biology

出版年：2015

作者：Yi Yuan (3)
Yaqin Zhang (4)
Bin Liu (5)
Heming Wu (3)
Yanjun Kang (7)
Ming Li (3)
Xin Zeng (2) (6)
Nongyue He (2)
Gen Zhang (1) (2)

3. Institute of Stomatology ; Nanjing Medical University ; Nanjing ; 210029 ; China
4. Department of Biochemistry and Molecular Biology ; Nanjing Medical University ; Nanjing ; 210029 ; China
5. Department of Biomedical Engineering ; Nanjing Medical University ; Nanjing ; 210029 ; China
7. Jiangnan University Medical School ; Wuxi ; Jiangsu ; 214122 ; China
2. The State Key Laboratory of Bioelectronics ; Department of Biological Science and Medical Engineering ; Southeast University ; Nanjing ; 210096 ; China
6. Maternal and Child Health Institute ; Nanjing Maternity and Child Health Care Hospital ; Nanjing ; 210029 ; China
1. Department of Cell Biology ; Nanjing Medical University ; Nanjing ; 210029 ; China

关键词：Graphene ; Gold nanoparticles ; Cell apoptosis ; Control release ; Target

刊名：Journal of Nanobiotechnology

出版年：2015

作者：Mingfeng Ma (1) (2)
Xiaofan Guo (1)
Ye Chang (1)
Chao Li (3)
Xin Meng (3)
Si Li (4)
Zhen-Xian Du (4)
Hua-Qin Wang (3)
Yingxian Sun (1)

1. Department of Cardiology ; The First Hospital of China Medical University ; 155 Nanjing North Street ; Heping District ; Shenyang ; 110001 ; Liaoning ; People鈥檚 Republic of China
2. Department of Cardiology ; Fenyang hospital of shanxi province ; Fenyang ; Shanxi ; People鈥檚 Republic of China
3. Department of Biochemistry and Molecular Biology ; China Medical University ; Shenyang ; Liaoning ; People鈥檚 Republic of China
4. Department of Endocrinology and Metabolism ; The First Hospital of China Medical University ; Shenyang ; Liaoning ; People鈥檚 Republic of China

关键词：Diabetic vascular complication ; Advanced glycation end products (AGEs) ; Cathepsin D (CatD) ; Autophagy ; Phenotypic modulation ; Vascular smooth muscle cells (VSMCs)

刊名：Molecular and Cellular Biochemistry

出版年：2015

作者：XiangYu Ding (1)
YuXuan Ren (2)
RongDe Lu (1)

1. Department of Physics ; University of Science and Technology of China ; Hefei ; 230026 ; China
2. Institute of Biochemistry and Cell Biology ; Shanghai Institutes for Biological Sciences ; Chinese Academy of Sciences ; Shanghai ; 200031 ; China

关键词：laser beam shaping ; spatial light modulator ; binary optics ; DMD ; Gamma curve correction ; 034202

刊名：SCIENCE CHINA Physics, Mechanics & Astronomy

出版年：2015

作者：ZiXiang Song (1)
Qi Chen (1)
Qi Ding (2)
Fei Zheng (3)
ChengWei Li (4)
LePing Xu (1)
HongBing Wang (2) (5)

1. Department of Adolescent Psychiatry and Behavioral Therapy ; Heping Hospital ; Changzhou ; 213003 ; China
2. Department of Physiology ; Michigan State University ; East Lansing ; MI ; 48824 ; USA
3. Department of Biochemistry and Molecular Biology ; Michigan State University ; East Lansing ; MI ; 48824 ; USA
4. College of Life Science and Agronomy ; Zhoukou Normal University ; Zhoukou ; 466001 ; China
5. Neuroscience Program ; Michigan State University ; East Lansing ; MI ; 48824 ; USA

关键词：animal behavior ; calmodulin ; CREB ; ERK1/2 ; intracellular signaling ; learning and memory

刊名：Science China Life Sciences

出版年：2015