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渐绿木霉基因组中PKS和NRPS基因的多样性分析
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  • 英文篇名:Analysis of PKS and NRPS Gene Diversity in Trichoderma viridescens
  • 作者:叶美金 ; 郭海霞 ; 杨财容 ; 薛飞龙 ; 刘红玲
  • 英文作者:Ye Meijin;Guo Haixia;Yang Cairong;Xue Feilong;Liu Hongling;College of Chemistry and Life Sciences,Chengdu Normal College;Triticeae Research Institute,Sichuan Agricultural University;College of Life Science,Shihezi University;
  • 关键词:渐绿木霉 ; 多样性 ; 聚酮合成酶 ; 非核糖体多肽合成酶
  • 英文关键词:Trichoderma viridescens;;Diversity;;Polyketide synthase;;Non-ribosomal peptide synthase
  • 中文刊名:FZZW
  • 英文刊名:Molecular Plant Breeding
  • 机构:成都师范学院化学与生命科学学院;四川农业大学小麦研究所;石河子大学生命科学学院;
  • 出版日期:2018-07-28
  • 出版单位:分子植物育种
  • 年:2018
  • 期:v.16
  • 基金:国家自然科学基金(31560656);; 成都师范学院人才引进项目(YJRC2017-3);; 四川省教育厅自然科学项目(18ZB0103);; 国家级大学生创新计划项目(201714389034)共同资助
  • 语种:中文;
  • 页:FZZW201814025
  • 页数:7
  • CN:14
  • ISSN:46-1068/S
  • 分类号:145-151
摘要
为了探究渐绿木霉(Trichoderma viridescens)基因组中聚酮合成酶(polyketide synthase,PKS)和非核糖体多肽合成酶(non-ribosomal peptide synthase,NRPS)的多样性,为寻找合成生物活性物质的潜在菌株提供科学依据。本研究通过18S rDNA序列分析,鉴定菌株SC-1为渐绿木霉(T.viridescens);利用兼并性引物对菌株SC-1的PKS和NRPS基因进行PCR扩增及序列测定分析,构建系统发育树,明确菌株SC-1的PKS和NRPS基因序列的系统进化地位。结果表明,菌株SC-1基因组中含有PKS I、NRPS基因片段;经比对,PKS I基因片段与已知Trichoderma atroviride PKS序列相似度为96%,NRPS基因片段与Trichoderma gamsii NRPS序列相似度为97%。本研究结果为渐绿木霉具有产生活性次生代谢产物的潜力,值得进一步开发研究和应用。
        To explore the inheritance in Trichoderma viridescens and the diversity of the polyketide synthase(PKS)and non-ribosomal peptide synthase(NRPS) genes and to lay the foundation of looking for the synthesis of the potential strains of bioactive substances.A strain of SC-1 was identified as T.viridescens on the basis of 18S rDNA.PKS and NRPS gene fragments were PCR amplified from genomic DNA with degenerate primers.The biosynthetic potential of strain SC-1 was accessed by bioinformatic and phylogenetic analyses of PKS and NRPS gene sequences.The results showed that the strain of SC-1 contains PKS I and NRPS gene.The PKS I gene sequence had 96% homology compared with Trichoderma atroviride PKS gene.The NRPS gene sequence had 97% homology with Trichoderma gamsii NRPS gene.This study demonstrated that T.viridescens had potential to synthesize bioactive secondary metabolite,therefore,their natural products are worth of further research and development.
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