摘要
为了探究渐绿木霉(Trichoderma viridescens)基因组中聚酮合成酶(polyketide synthase,PKS)和非核糖体多肽合成酶(non-ribosomal peptide synthase,NRPS)的多样性,为寻找合成生物活性物质的潜在菌株提供科学依据。本研究通过18S rDNA序列分析,鉴定菌株SC-1为渐绿木霉(T.viridescens);利用兼并性引物对菌株SC-1的PKS和NRPS基因进行PCR扩增及序列测定分析,构建系统发育树,明确菌株SC-1的PKS和NRPS基因序列的系统进化地位。结果表明,菌株SC-1基因组中含有PKS I、NRPS基因片段;经比对,PKS I基因片段与已知Trichoderma atroviride PKS序列相似度为96%,NRPS基因片段与Trichoderma gamsii NRPS序列相似度为97%。本研究结果为渐绿木霉具有产生活性次生代谢产物的潜力,值得进一步开发研究和应用。
To explore the inheritance in Trichoderma viridescens and the diversity of the polyketide synthase(PKS)and non-ribosomal peptide synthase(NRPS) genes and to lay the foundation of looking for the synthesis of the potential strains of bioactive substances.A strain of SC-1 was identified as T.viridescens on the basis of 18S rDNA.PKS and NRPS gene fragments were PCR amplified from genomic DNA with degenerate primers.The biosynthetic potential of strain SC-1 was accessed by bioinformatic and phylogenetic analyses of PKS and NRPS gene sequences.The results showed that the strain of SC-1 contains PKS I and NRPS gene.The PKS I gene sequence had 96% homology compared with Trichoderma atroviride PKS gene.The NRPS gene sequence had 97% homology with Trichoderma gamsii NRPS gene.This study demonstrated that T.viridescens had potential to synthesize bioactive secondary metabolite,therefore,their natural products are worth of further research and development.
引文
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