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NECL2/TSLC1在肺癌细胞中的表达调控研究
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摘要
肺癌的早期诊断和治疗成为临床上一大难题。随着分子生物学技术的飞速发展,研究癌症的基因发病机制、基因诊断和基因治疗受到大家的关注。近期研究已表明肺癌细胞中常存在DNA甲基化状态的改变,DNA异常甲基化是一种表观遗传(epigenetic)改变而非基因水平改变。这种现象不仅可以激活原癌基因的表达,而且可使一些抑癌基因转录功能失活。
     中国医学科学院基础研究所生化实验室新发现的基因NECL2在多种肿瘤中表达下降或失活,国外报道与启动子区甲基化相关,用去甲基化试剂处理的一些肿瘤细胞系中,NECL2的表达水平恢复到正常,这提示NECL2启动子区的甲基化可能是导致NECL2表达下调的原因。考虑到NECL2在肿瘤抑制的过程中有着重要作用,并依据启动子区甲基化与NECL2表达下调相关的线索和甲基化可逆性特征.本文在对感兴趣的肺癌细胞系中,初步研究了NECL2的表达调控机制。
     首先,我们在一例正常脑组织和三种肺癌细胞系(A549、NCI-H446、Calu-3)中检测了NECL2的表达谱,运用bisulfite sequencing(亚硫酸氢盐修饰后测序)和甲基化酶抑制剂5-AzaC处理方法得知,NECL2在肺癌细胞系中的表达缺失是由启动子区的甲基化引起,去甲基化使NECL2恢复表达,DNA甲基化检测及DNA甲基化的可逆性特征为临床肿瘤诊断和治疗提供了依据。
     下一步,根据生物信息学分析的结果,构建了人NECL2基因5'非编码区系列缺失报告基因质粒,应用双荧光素酶报告基因实验,推测人NECL2的核心启动子区可能位于ATG上游的—68到—329区域内。
     我们克隆了Spl的编码区序列,构建了带V5标签的Spl真核表达质粒,与带有人NECL2基因核心启动子区的报告基因质粒共转染A549和NCI-H446细胞,以检测Sp1对人NECL2启动子的转录活性的影响。应用双荧光素酶报告基因实验,我们发现在肺癌细胞中,过表达外源性Sp1对人NECL2启动子的转录活性无明显影响。
     最后,用化疗药顺铂处理体外培养的A549和NCI-H446细胞,用流式细胞仪检测了处理后细胞发生的变化,结果表明,顺铂可能是通过破坏细胞周期和引起细胞凋亡而杀死肺癌细胞,可以为以后的深入研究提供一点线索。
     综上所述,本文通过bisulfite sequencing和5-AzaC处理实验,再次验证了NECL2在肺癌细胞中的表达缺失是由启动子区的甲基化引起。DNA甲基化程度检测可能成为癌症早期诊断的分子标志物,DNA甲基化的可逆性特征为临床抗肿瘤治疗提供了一种新途径。通过双荧光素酶报告基因实验,首次推测了人NECL2可能的核心启动子区,并对转录因子Sp1对人NECL2启动子转录活性的影响进行了初步分析,为阐明人NECL2的表达调控机制奠定了基础。
In previous study of National Laboratory of Medical Biology,we have discovered a new cDNA clone whose structure is similar with those of nectin family,so named nectin-like molecule 2,that is NECL2.NECL2 belongs to the immunoglobulin superfamily and is widely expressed in multiple tissues. The structure of NECL2 is:a signal peptide,three immunoglobulin domains, a transmembrane region and a short cytoplasmic region.Up to now NECL2 has the following functions:Ca~(2+)-independent cell-cell adhesion,synapse formation and tumor suppression.Down regulation or silent of NECL2 expression is found in many types of tumors.Others' work showed that in those tumors exhibiting loss of heterozygosity,inactivating mutation was rarely found,whereas promoter methylation was observed with high incidence and was correlated with down regulation of NECL2 expression. Furthermore,expression level of NECL2 was restored after treating cancer cell lines with 5-Aza-2-deoxycytidine.These results suggest that promoter methylation is perhaps the cause of down regulation of NECL2 expression. Considering the importance of NECL2 in neural development and tumor suppression,and the correlation between promoter methylation and down regulation of NECL2 expression,we studied the regulation of NECL2 expression in lung cancer cell lines which we are interested with.
     First,we detected the expression pattern of NECL2 in one human normal brain tissue and three lung cancer cell lines(A549,NCI-H446,Calu-3).Based on the prediction result which shows that there is a CpG island in 5' non-coding region,we know promoter methylation can lead to the silent of NECL2 in lung cancer cell lines using bisulfite sequencing and 5-AzaC treatment.
     Then,we used bioinformatics method to analyze the 5' non-coding region of human NECL2.The result showed that there are six conserved nucleotide sequences within the 4Kb region just upstream the human/mouse NECL2 translation start site.We also predicted the possible cis-acting elements.
     Next,we extracted the genome from normal brain tissue and cloned a 1.7Kb fragment of human NECL2 5' non-coding region.Based on the result of bioinformatics analysis,we generated a series of promoter deletion constructs.With dual luciferase reporter assay,we deduced that the possible core promoter for human NECL2 is from -68 to -329,designated ATG as+1.
     Bioinformatics analysis also showed that there are three putative Spl binding sites within the core promoter of human NECL2.Therefore we cloned the complete coding region of Sp1 and obtained an eukaryocyte expression plasmid of Sp1.We co-transfected this plasmid with the core promoter-reporter plasmid to test the possible effect of Sp1 on human NECL2 promoter transcription activity.With dual luciferase reporter assay,we found that over-expression of Sp1 in lung cancer cell lines does not affect the human NECL2 promoter transcription activity significantly.
     Finally,we treated cultured A549 and NCI-H446 cell lines with DDP and detected the changes of cells by cell cytometry.The result showed DDP killed lung cancer cells possibly by destroying cell cycle and inducing cell apoptosis, this can provide some clues for further study.
     In conclusion,we validated promoter methylation of NECL2 could lead to the silent of NECL2 in lung cancer cells by bisulfite sequencing and 5-AzaC treatment;with dual luciferase reporter assay,we deduced the possible core promoter for human NECL2 for the first time.We also analyzed the effect of Sp1 transcription factor on human NECL2 promoter transcription activity.These work provide basis for further elucidation of the regulation of human NECL2 expression.
引文
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